At a glance

Obsidian Joplin
Best for Individuals who want local-first, markdown-based notes Privacy-focused users wanting open-source note-taking
Starting price Free Free
Free tier
Open source
Free tier available
Open source
Backlinks
E2E Encryption
Graph View
Local Storage
Markdown
Open Source
Plugins
Webclipper

Obsidian

Strengths

  • Local-first — your notes are plain markdown files you own
  • Powerful bidirectional linking and graph view
  • Huge plugin ecosystem (1,000+)
  • Works offline, fast and responsive

Weaknesses

  • No real-time collaboration
  • Sync requires paid add-on or third-party solution
  • Steeper setup than Notion for non-technical users
  • Mobile app is less polished than desktop

Joplin

Strengths

  • Open source and transparent
  • Open-source codebase gives you full transparency and community-driven development
  • Fully open-source — you can self-host, audit the code, and avoid vendor lock-in
  • The core product is free with no paywalled essentials

Weaknesses

  • May lack some advanced features
  • Self-hosting is free but requires server maintenance and DevOps knowledge
  • Fewer built-in features means you may need additional tools to cover gaps
  • Moving notes out to another platform can be difficult — export options vary

The bottom line

Pricing: Both Obsidian and Joplin are free, so this decision comes down to features and philosophy rather than budget.

Feature gaps: Obsidian offers Backlinks, Graph View and Local Storage that Joplin lacks. Joplin brings E2E Encryption, Open Source and Webclipper that Obsidian does not have. Both share Markdown.

Team fit: Both tools target individuals teams, so the decision hinges on features and workflow fit rather than scale.

Open source: Joplin is open source, meaning you can self-host, audit the code, and avoid vendor lock-in. Obsidian is proprietary — you are trusting the vendor with your data and uptime.

Where each tool shines: Obsidian's biggest strengths are: local-first — your notes are plain markdown files you own. powerful bidirectional linking and graph view. Joplin's biggest strengths are: open source and transparent. open-source codebase gives you full transparency and community-driven development.

Watch out for: With Obsidian, users commonly note that no real-time collaboration. With Joplin, the main complaint is that may lack some advanced features.

Choose Obsidian if...

  • You need a tool built for individuals who want local-first, markdown-based notes
  • You specifically need Backlinks and Graph View
  • You care about powerful bidirectional linking and graph view

Choose Joplin if...

  • You need a tool built for privacy-focused users wanting open-source note-taking
  • You need self-hosting, data sovereignty, or the ability to audit source code
  • You specifically need E2E Encryption and Open Source
  • You care about open-source codebase gives you full transparency and community-driven development

Looking for more options?

Related comparisons

Explore more